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NumeRe
Framework for numerical computations, data analysis and visualisation
...Just enter 'plot sin(x)'. You want to load some data? Enter 'load "path/to/your/file"' or drag the file into the terminal. You need to fit a function to the data? Enter 'fit data() -with=YOURFUNCTION(x)' Need assistance? Enter 'help topic' into the terminal or simply press [F1]. Find us on Discord: https://discord.gg/s5tSjwU Follow us on Mastodon: https://fosstodon.org/@numeredevs Visit our page: https://www.numere.org Buy us a coffee: https://ko-fi.com/numere We've moved to GitHub: https://github.com/numere-org -
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MICA-aligner
Next-generation sequencing short reads aligner based on Intel® MIC
Latest Code in GitHub: https://github.com/aquaskyline/MICA-aligner To better utilize MIC-enabled computers for NGS data analysis, we developed a new short-read aligner MICA that is optimized in view of MIC’s limitation and the extra parallelism inside each MIC core. Experiments on aligning 150bp paired-end reads show that MICA using one MIC board is ~4.85 times faster than the CPU-(multi-core)-based BWA-MEM and about the same speed as the GPU-based SOAP3-dp. Furthermore, MICA’s... -
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