Search Results for "parallel genetic algorithm"

...PlatEMO consists of a number of MATLAB functions without using any other libraries. Any machines able to run MATLAB can use PlatEMO regardless of the operating system. PlatEMO includes more than ninety existing popular MOEAs, including genetic algorithm, differential evolution, particle swarm optimization, memetic algorithm, estimation of distribution algorithm, and surrogate model-based algorithm. Most of them are representative algorithms published in top journals after 2010. Users can select various figures to be displayed, including the Pareto front of the result, the Pareto set of the result, the true Pareto front, and the evolutionary trajectories of any performance indicator values. ...

TIGRE is an open-source toolbox for fast and accurate 3D tomographic reconstruction for any geometry. Its focus is on iterative algorithms for improved image quality that have all been optimized to run on GPUs (including multi-GPUs) for improved speed. It combines the higher-level abstraction of MATLAB or Python with the performance of CUDA at a lower level in order to make it both fast and easy to use. TIGRE is free to download and distribute: use it, modify it, add to it, and share it. Our...

High-performance package for SemiDefinite Programs The software SDPA (SemiDefinite Programming Algorithm) is one of the most efficient and stable software packages for solving SDPs based on the primal-dual interior-point method.

Smart-Algorithm is a repository implementing a variety of intelligent / metaheuristic optimization algorithms (e.g. Genetic Algorithm, Ant Colony, Particle Swarm, Immune Algorithm). The implementations are provided in multiple languages (Java, Python, MATLAB). The repository’s aim is to offer reference implementations of “smart” algorithms for tasks like route planning, optimization, or algorithm learning.

We present a versatile and fast MATLAB program (UmUTracker) that automatically detects and tracks particles by analyzing long video sequences acquired by either light microscopy or digital holography microscopy (DHM). Our program finds the 2D particle center position using an isosceles triangle transform and the axial position by a fast implementation of Rayleigh-Sommerfeld numerical reconstruction algorithm using a one dimensional radial intensity profile. *Updates v1.1: 2017/11/21- Bug...

...Carbon catabolite repression (CCR) is the main mechanism controlling carbohydrate uptake in bacteria, and therefore also controlling whether or not different carbon sources are metabolized in parallel or sequentially. Although described as a paradigm of the regulation of bacterial metabolism, the underlying mechanisms remain controversial. The models in the ensemble can be categorized according to regulatory, stoichiometric, and physiological constraints and differ from each other on only a single aspect. We distinguish four groups of models: (1) flux balance models that only define reaction kinetics for substrate uptake and by-product excretion, (2) kinetic models without and (3) kinetic models with regulation on the metabolic and/or genetic level, and (4) resource allocation models.

The availability of ontologies and systematic documentations of phenotypes and their genetic associations has enabled large-scale network-based global analyses of the association between the complete collection of phenotypes (phenome) and genes. BiRW is a package designed for analysis and prediction of the phenome-genome associations. BiRW package contains a program for analysis of circular bigraphs (CBGs) and the bi-random walk (BiRW) algorithm to capture the CBG patterns in the networks for unveiling human and mouse phenome-genome association. ...

This is a toolbox to run a GA on any problem you want to model. You can use one of the sample problems as reference to model your own problem with a few simple functions. You can collaborate by defining new example problems or new functions for GA, such as scaling, selection or adaptation methods. In that case, you should then include your credits in the file, upload it to matlab central and contact the author. Suggestions are also welcome but naturally I won't be able to attend...