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The MITK Workbench is a free, open-source application for medical image visualization, segmentation, registration, and much more.
Beyond the Workbench application, MITK is a comprehensive C++ framework for medical image computing. It provides a modular foundation for extending the MITK Workbench with custom plugins or developing your own medical imaging applications and research prototypes.
Desktop application for merging multiple SDF files into a single SDF
...Batch Processing: Automatically finds and merges all SDF files in a selected folder
3. Real-time Progress Tracking: Visual progress bar and status updates during merging
Technical Specifications:
1. Language: Python 3
2. GUI Framework: Tkinter
3. Chemistry Library: RDKit for chemical data processing
4. File Formats: Input/Output in SDF format
Citation
Md. Ismiel Hossen, A. (2026). SDF Merger: A Desktop and Web Tool for Merging Chemical Structure Data Files (v1.1). Zenodo. https://doi.org/10.5281/zenodo.18291398
MIVF - Medical Imaging and Visualization Factory,
is a framework for medical applications. It supplies a platform, in which image processing and 3D visualization algorithms can be employed as reusable components (functional modules or plugins).
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QuickDicom is an easy to use dicom medical imaging package for Mac OSX, providing QuickLook, Spotlight, Quartz Composer, Window/Level and a dicom file analyzer. Also included is the iiDicom Framework for image/dictionary usage in Objective C and Python.
The Genetic Architecture Framework is intended to explore and experiment with artificial life techniques using a genetic base for the physical and neural networks for the brain, in a game based simulated world.
A laboratory information management system (LIMS) geared towards academic research groups in the life sciences. Written in Python and using the Django framework, you run this software on your own server.