Open Source Scientific/Engineering Software - Page 5
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Scientific/Engineering Software
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Client software for users of the Automatic Packet Reporting System amateur radio network.
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SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format. The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools
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Mecrisp - A family of optimising native code Forth implementations for MSP430, ARM Cortex M, RISC-V RV32IM(C), MIPS M4K and FPGAs.
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OpenMRS
Open source Health IT for the planet
OpenMRS is a community-developed, open source, enterprise electronic medical record system. Our mission is to improve health care delivery in resource-constrained environments by coordinating a global community to creates and support this software. -
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TinyCAD is a program for drawing electrical circuit diagrams commonly known as schematic drawings. It supports standard and custom symbol libraries. It supports PCB layout programs with several netlist formats and can also produce SPICE simulation netlists. It is also often used to draw one-line diagrams, block diagrams, and presentation drawings. The source code for TinyCAD is now on GitHub: https://github.com/matt123p/TinyCAD Online documentation can be found here: https://github.com/matt123p/TinyCAD/wiki
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Open data for a Khmer language corpus and lexicographic data that can be used for the development of free language tools for Khmer language, such as automatic translators, dictionaries, linguistic analysis tools, etc.
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TILP - TI Linking Program
TI graphing calculators <-> computer communication software
TILP (formerly GtkTiLink) can transfer data between Texas Instruments graphing calculators and a computer. It works with all link cables (parallel, serial, Black/Gray/Silver/Direct Link) and it supports the TI-Z80 series (73..86), the TI-eZ80 series (83PCE, 84+CE), the TI-68k series (89, 92, 92+, V200, 89T) and the Nspire series (Nspire Clickpad / Touchpad / CX, both CAS and non-CAS). The project is now managed on Github, https://github.com/debrouxl/tilp_and_gfm . It uses the libti* libraries, https://github.com/debrouxl/tilibs . Install script for *nix: https://github.com/debrouxl/tilp_and_gfm/blob/master/tilp/trunk/build/scripts/install_tilp.sh -
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Orange Data Mining
Orange: Interactive data analysis
Open source machine learning and data visualization. Build data analysis workflows visually, with a large, diverse toolbox. Perform simple data analysis with clever data visualization. Explore statistical distributions, box plots and scatter plots, or dive deeper with decision trees, hierarchical clustering, heatmaps, MDS and linear projections. Even your multidimensional data can become sensible in 2D, especially with clever attribute ranking and selections. Interactive data exploration for rapid qualitative analysis with clean visualizations. Graphic user interface allows you to focus on exploratory data analysis instead of coding, while clever defaults make fast prototyping of a data analysis workflow extremely easy. Place widgets on the canvas, connect them, load your datasets and harvest the insight! When teaching data mining, we like to illustrate rather than only explain. -
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Elmer finite element software
Open source finite element software for multiphysical problems
Elmer is a finite element software for numerical solution of partial differential equations and multiphysical problems. It includes models of structural mechanics, fluid dynamics, heat transfer, electromagnetics etc. Elmer home is www.csc.fi/elmer -
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Simulation of Urban MObility
SUMO is a microscopic, multi-modal traffic simulation.
SUMO is an open source, highly portable, microscopic and continuous traffic simulation package designed to handle large networks. It allows for intermodal simulation including pedestrians and comes with a large set of tools for scenario creation. The code and the issue tracker can be found at https://github.com/eclipse-sumo/sumo/ The documentation can be found at https://sumo.dlr.de/docs/ -
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Terra Incognita
GPS mapping and management software
Program for downloading web source maps or local files maps for various programs or GPS devices. Terra Incognita™ main features: navigating through map by simple clicking generating OziExplorer, Kmz, JNX, GPSdash or TrekBuddy calibrated map file possibility to use many web map sources Google Maps™, Bing™, Open street map ... managing of waypoints or tracks saved in gpx and many other formats selected user defined map area for saving simplified and easy user interface downloading and saving maps on background automatic split of very large areas to many smaller map files -
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CloudCompare
CloudCompare main repository
CloudCompare is a 3D point cloud (and triangular mesh) processing software. It was originally designed to perform comparison between two 3D points clouds (such as the ones obtained with a laser scanner) or between a point cloud and a triangular mesh. It relies on an octree structure that is highly optimized for this particular use-case. It was also meant to deal with huge point clouds (typically more than 10 million points, and up to 120 million with 2 GB of memory). -
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Organic Maps
Organic Maps is a free Android & iOS offline maps app for travelers
Organic Maps is a free Android & iOS offline maps app for travelers, tourists, hikers, and cyclists. It uses crowd-sourced OpenStreetMap data and is developed with love by MapsWithMe (MapsMe) founders and our community. No ads, no tracking, no data collection, no crapware. Your donations and positive reviews motivate and inspire our small team! Organic Maps is the ultimate companion app for travelers, tourists, hikers, and cyclists. Detailed offline maps with places that don't exist on other maps, thanks to OpenStreetMap. Cycling routes, hiking trails, and walking paths. Contour lines, elevation profiles, peaks, and slopes. Turn-by-turn walking, cycling, and car navigation with voice guidance. Bookmarks export and import in KML/KMZ formats (GPX is planned). Organic Maps app is free from trackers and other bad stuff. Organic Maps is pure and organic, made with love. -
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Hunspell is a spell checker and morphological analyzer library and program designed for languages with rich morphology and complex compounding or character encoding. Hunspell interfaces: Curses, Ispell compatible pipe interface, OpenOffice.org UNO module
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KherveFitting
Fit X-ray Photoelectron Spectroscopy (XPS) and XAS data
KherveFitting is a full featured XPS, XAS and Raman fitting software for Windows & macOS that is simple and easy to use. KherveFitting can open Excel files (.xlsx) or import/convert .vms, .avg, .kal, .spe (Thermo, Kratos, Specs, Scienta, Omicron, Phi) files into Excel format. 5 background types available: Tougaard, Shirley, Smart, Adaptive Smart. Various peak fitting models: Product and Sum of Gaussian and Lorentzian (GL & SGL), Voigt, Asymmetric Lorentzian (LA), Doniac-Sunjic (G*DS) and many more . Fit single peaks or doublets. Doublet splitting and RSF values are stored in a library file. Several intensity calibration available:TPP-2M, Scoffield, Wagner. Atomic concentration acurately calculated and matching with Thermo Avantage software. YouTube Channel: https://www.youtube.com/@xpsexamples-imperialcolleg6571 -
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GCBASIC is an open-source BASIC compiler for 8 bit Microchip PIC, Atmel AVR legacy, AVRDx and LGT microcontrollers. See https://ko-fi.com/post/The-Story-of-GCBASIC-Making-Microcontroller-Progr-D1D319SJ72 for story of GCBASIC. This is a continuous release project. The latest release is always available. This will give you the most complete development toolchain to create and program 8-bit PIC, AVR and LGT microcontrollers. We have added new capabilities that make GCBASIC the easiest tool set available - supporting over 1400 microcontrollers with tools to make this fun and simple. Please see the download section for your options. We have two IDEs, we have just the compiler and we have a minimal install - it is your choice. Please see the homepage here: https://gcbasic.com
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PonyProg is a serial device programmer based on some simple and cheap interfaces for the PC and a user friendly GUI available for WindowsXP/7/8/10 and Intel Linux. Its purpose is programming every serial device like eeproms and microcontrollers
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smina
Scoring and Minimization with AutoDock Vina
A fork of AutoDock Vina that is customized to better support scoring function development and high-performance energy minimization. smina is maintained by David Koes at the University of Pittsburgh and is not directly affiliated with the AutoDock project. -
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Arduino ASCOM Focuser Pro2 DIY
Version 2 of the myFocuser Project
myFocuserPro2 (myFP2) is an ASCOM - INDI - LINUX - WINDOWS telescope focuser with a large range of options. 315,606+ file downloads. The most popular focuser project. (c) Copyright Robert Brown 2014-2026. All Rights Reserved. Code or portions of code may not be copied or used without written permission from the author. Other Focuser Projects myFP2ESP32 WiFi - https://sourceforge.net/projects/myfocuserpro2-esp32/ [ESP32 Only] myFP2ESP8266 WiFi - https://sourceforge.net/projects/myfp2esp8266-focus-controller/ myFP2N - Nextion touch screen display - https://sourceforge.net/projects/arduinoascomfocuserpro2diy/files/myFocuserPro2N%20NEXTION%20TFT%20DISPLAY/ myFP2M - Ready made Controllers https://sourceforge.net/projects/arduinoascomfocuserpro2diy/files/myFocuserPro2M/ Please look in the Files-Documents folder for more information. https://sourceforge.net/projects/arduinoascomfocuserpro2diy/files/Documentation/ -
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SimulIDE
Real Time Electronic Circuit Simulator.
Real Time Electronic Circuit Simulator. Include PIC, AVR and Arduino simulation. Code Editor & Debugger for Arduino, GcBasic, PIC asm, AVR asm. Downloads: https://simulide.com/p/downloads/ WebSite: https://simulide.com Forum: https://simulide.com/p/forum/ Patreon: https://www.patreon.com/simulide AVR simulation provided by simavr: https://github.com/buserror/simavr PIC simulation provided by GpSim: http://gpsim.sourceforge.net/ -
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Basic features: 1. Generate KPOINTS, POTCAR and INCAR for a given POSCAR file; 2. Elastic-constants using stress-strain or energy-strain methods; 3. Equation-of-state fitting; 4. Suggested k-paths for a given crystal structure; 5. Optical adsorption coefficient; 6. Band structure unfolding; 7. Fermi surface; 8. Density-of-states and band-structure; 9. Charge/spin density, Charge density difference; 10. Vacuum level and work function; 11. Wave-function analysis; 12. Molecular-dynamics analysis; 13. Effective mass of carrier; 14. Symmetry finding and operations; 15. 3D band structures; More details can be found in its official website https://vaspkit.com.
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Practically Random
statistical tests & psuedo- random number generators (RNGs, PRNGs)
Randon number generation & testing. The best suite of statistical tests for fast PRNGs anywhere. Multithreaded for speed, command line tools for automation, no upper limit on data size. Also, a variety of C++ pseudo-random number generators with well designed interfaces aimed at practical uses, not just research. -
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Rigs of Rods
A 3D simulator game where you can drive, fly, and sail
Rigs of Rods is a 3D simulator game where you can drive, fly and sail various vehicles using an accurate and unique soft-body physics engine. Since 2014, the development continued at https://github.com/RigsOfRods/rigs-of-rods UPDATE: 10/30/2016: removed opencandy installers, replaced with zip files. -
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OpenJUMP is a community driven fork of JUMP the "Java Unified Mapping Platform" GIS software. The original JUMP was developed by Vivid Solutions, released under GPL2 in 2003 and discontinued in 2006. During 2004 already some enthusiastic developers joined together to enhance further the features of JUMP. They launched an independent development branch called OpenJUMP. The name gives credit to the original JUMP development, and at the same time describes the objectives of this project to be fully open to anyone wanting to contribute. These days OpenJUMP is developed and maintained by (some few) volunteers around the globe. If you need functionality or even better want to contribute you are very welcome to contact us at our mailing list.
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SciPy
SciPy library main repository
This is the main repository for the SciPy library, one of the core packages that make up the SciPy stack. SciPy is an open source software used in the fields of mathematics, science, and engineering, with modules for statistics, optimization, integration, linear algebra, signal and image processing, and many more. The SciPy library contains many of the user-friendly and efficient numerical routines, including those for numerical integration, interpolation, and optimization. SciPy is built to work with NumPy, a software that provides convenient and fast N-dimensional array manipulation. Both SciPy and NumPy run on all popular operating systems, are fast and easy to install, and are powerful yet easy to use. They’re currently depended upon by numerous leading scientists and engineers all over the world. Try them for yourself!
