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  • 1
    ...Obtaining the teachingbox: FOR USERS: If you want to download the latest releases, please visit: http://search.maven.org/#search|ga|1|teachingbox FOR DEVELOPERS: 1) If you use Apache Maven, just add the following dependency to your pom.xml: <dependency> <groupId>org.sf.teachingbox</groupId> <artifactId>teachingbox-core</artifactId> <version>1.2.3</version> </dependency> 2) If you want to check out the most recent source-code: git clone https://git.code.sf.net/p/teachingbox/core teachingbox-core Documentation: https://sourceforge.net/p/teachingbox/documentation/HEAD/tree/trunk/manual/
    Downloads: 1 This Week
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  • 2
    High-Throughput Tabular Data Processor
    ...Citation: Madanecki P, Bałut M, Buckley PG, Ochocka JR, Bartoszewski R, Crossman DK, et al. (2018) High-Throughput Tabular Data Processor – Platform independent graphical tool for processing large data sets. PLoS ONE 13(2): e0192858. https://doi.org/10.1371/journal.pone.0192858
    Downloads: 0 This Week
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  • 3
    JPIV

    JPIV

    Particle Image Velocimetry

    JPIV is a platform independent, graphical stand-alone application for Particle Image Velocimetry (PIV) written in Java. PIV is an optical technique for measuring fluid flow velocities. JPIV moved to GitHub. Please visit us at: https://eguvep.github.io/jpiv/
    Downloads: 0 This Week
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  • 4
    NOTE: For latest version, please visit https://github.com/ispasic/FlexiTerm. FlexiTerm is an open-source software tool for automatic term recognition. FlexiTerm uses a range of methods to neutralise the main sources of term variation. FlexiTerm is robust enough for less formally structured texts, such as those found in patient blogs or medical notes.
    Downloads: 0 This Week
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    BisSNP

    Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller

    Now in Github: https://github.com/dnaase/Bis-tools/tree/master/Bis-SNP BisSNP is a package based on the Genome Analysis Toolkit (GATK) map-reduce framework for genotyping in bisulfite treated massively parallel sequencing (Bisulfite-seq, NOMe-seq and RRBS) on Illumina platform. It uses bayesian inference with either manually specified or automatically estimated methylation probabilities of different cytosine context(not only CpG, CHH, CHG in Bisulfite-seq, but also GCH et.al. in other bisulfite treated sequencing) to determine genotypes and methylation levels simultaneously. ...
    Downloads: 1 This Week
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  • 6
    FUMOLA - Functional Mock-up Laboratory

    FUMOLA - Functional Mock-up Laboratory

    An FMI-based co-simulation framework.

    FUMOLA is a co-simulation framework specifically designed to support the features offered by the FMI specification. It provides a flexible platform that allows to configure and execute co-simulation setups in an easy way. FUMOLA is developed on top of the Ptolemy II framework (https://ptolemy.eecs.berkeley.edu) and the FMI++ library (http://fmipp.sourceforge.net). The online documentation of FUMOLA is available here: https://sourceforge.net/p/fumola/wiki/Home/
    Downloads: 0 This Week
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  • 7
    Image to Excellon Converter

    Image to Excellon Converter

    Convert any image to a Excellon Drill File

    ...For best result, you can adjust color, tolerance filters and circle recognition parameters and see a preview image before creating output file. Demonstration video: Coming soon! Useful information of this application through: https://imagetoexcellon.wordpress.com/ If you need to convert from image to gerber, check this app: https://sourceforge.net/projects/imagetogerberconverter/ If this application has been useful to you, please donate using the Donate tab above.
    Downloads: 0 This Week
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  • 8
    HermeneutiX

    HermeneutiX

    Your graphical tool for Syntactic/Semantic Structure Analysis of texts

    ...HermeneutiX is now part of SciToS (the scientific tool set). Starting with version 2.0.0, HermeneutiX can be found on GitHub. Please check out the release summary: https://github.com/scientific-tool-set/scitos/releases For an introduction, check out this video: https://youtu.be/uQjewyG0Ad8 PS: To run a Java application such as HermeneutiX (i.e. SciToS) you need a Java Runtime Environment (JRE). HermeneutiX is currently built to be compatible down to JRE version 6. You may download the current JRE here: http://www.java.com/en/download
    Downloads: 0 This Week
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  • 9
    freedomotic

    freedomotic

    Open IoT Framework

    ...Freedomotic can interact with well known standard building automation protocols as well as with "do it yourself" solutions. It treats the web, social networks and branded frontends as first class components of the system. [GITHUB REPOSITORY] https://github.com/freedomotic/freedomotic [USERS' MANUAL] http://freedomotic-user-manual.readthedocs.io/ [DEVELOPERS' MANUAL] http://freedomotic-developer-manual.readthedocs.io/ [INTERNATIONAL COMMUNITY] https://groups.google.com/forum/#!forum/freedom-domotics [ITALIAN COMMUNITY] https://groups.google.com/forum/#!forum/freedomotic-it [REPORT AN ISSUE] https://github.com/freedomotic/freedomotic/issues
    Downloads: 1 This Week
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  • 10
    MYRA

    MYRA

    A collection of ACO algorithms for the data mining classification task

    ...They are build using a modular architecture, so they can be easily extended to incorporate different procedures and/or use different parameter values. This project is now hosted at: https://github.com/febo/myra
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    Downloads: 6 This Week
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  • 11

    spectralHMM

    A spectral method for inferring selection from time series data

    ***WARNING*** This software was migrated to: https://github.com/popgenmethods/spectralHMM Support and updates will only be available at this new address. This software implements the algorithms described in the following paper: Steinrücken, M., Bhaskar, A. and Song, Y.S. A novel spectral method for inferring general diploid selection from time series genetic data. Annals of Applied Statistics, Vol. 8, No. 4 (2014) 2203-2222
    Downloads: 0 This Week
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  • 12
    NOTE: Use of this codebase is NOT RECOMMENDED. This project has been migrated to github at http://jaerproject.net (or https://github.com/SensorsINI/jaer for the Java code). Commits have been disabled for the subversion sourceforge repository and new development is being done on the github repository. Java tools for Address-Event Representation (AER) neuromorphic processing. Uses USB hardware. See wiki at https://sourceforge.net/p/jaer/wiki/
    Downloads: 0 This Week
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  • 13
    DORY

    DORY

    For mining KASH proteins (SUN domain-interacting proteins)

    ....*** Please see the following publication for detail: Zhou X, Graumann K, Wirthmueller L, Jones JDG, Meier I (2014) Identification of unique SUN-interacting nuclear envelope proteins with diverse functions in plants. The Journal of Cell Biology 205(5):677-692. http://jcb.rupress.org/content/205/5/677.full Please see other useful tools for biology research: https://sourceforge.net/projects/cloversystem/?source=directory
    Downloads: 0 This Week
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  • 14

    Elexis Praxisprogramm

    An Eclipse RCP program for all aspects of a (Swiss) medical practice

    ...At http://elexis-forum.ch/ users have a place to share their experiences with other peoples. Developers and anybody trying to compile Elexis from scratch should look at https://github.com/elexis/elexis-3-core/tree/master/ch.elexis.sdk The documentation is found under http://wiki.elexis.info/
    Downloads: 1 This Week
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  • 15
    SmartHMA

    SmartHMA

    Mobile implementation of HMA standardised EO data sources

    ...Please visit wiki pages for more information: http://wiki.services.eoportal.org/tiki-index.php?page=SmartHMA or http://wasat.github.io/smarthma SmartHMA User Manual https://sourceforge.net/projects/smarthma/files/SmartHMA_user_manual.pdf Youtube Manual https://goo.gl/bvP5yz
    Downloads: 0 This Week
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  • 16
    QuakeReport

    QuakeReport

    An app that lists earthquake occurrences (based from USGS)

    ...Copy the QuakeReport_v1.0.apk file to your phone 3. Follow the instructions in the installation guide screenshots to install the app Note: This app was made as part of the Udacity's Android Basics course https://www.udacity.com/course/android-basics-networking--ud843
    Downloads: 0 This Week
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  • 17

    fantail-mlkit

    The fantail machine learning toolkit (Moved)

    Moved to https://github.com/quansun/fantail-ml
    Downloads: 0 This Week
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  • 18
    A modeling and simulation tool for Routing problems on Graphs, tccrouter is a java desktop application that provides a 2d map for building graphs and simulating a variety of real world routing solutions: Shortest path, TSP, VRP, VRP-TW. Check Git repository. https://github.com/guilhebl/routerapp
    Downloads: 0 This Week
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  • 19
    HAPI
    The HAPI HL7v2 project has moved to the following home: https://hapifhir.github.io/hapi-hl7v2/
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    Downloads: 79 This Week
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  • 20
    PMM-Lab

    PMM-Lab

    Predictive Microbial Modeling plug-in for KNIME

    ...PMM-Lab has been initiated and provided by the Federal Institute for Risk Assessment - BfR (Berlin, Germany). The software is in Beta status. Before using the software you have to read and accept the license and disclaimer (https://sourceforge.net/p/pmmlab/wiki/Disclaimer/). If you do not agree, do not use this software.
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    Downloads: 0 This Week
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  • 21

    IQM-Plugin-FFI

    FFI - fractal fragmentation index

    ...Fractal analysis for studying the evolution of forests, Chaos, Solitons & Fractals, 2016, Vol 91, 310-318. Installation instruction: Copy newest jar file to the "Plugins" directory which should be located in the directory of your local IQM main application. IQM: https://sourceforge.net/projects/iqm/ Authors of this plugin: Ion Andronache, University of Bukarest, Romania Daniel Peptenatu, University of Bukarest, Romania Helmut Ahammer, Medical University of Graz, Austria
    Downloads: 0 This Week
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  • 22
    XML-Print

    XML-Print

    XML-Print: typesetting arbitrary XML documents in high quality

    ...Andrea Rapp). Its goal is the creation of a XML formatter designated especially for the needs of the “Digital Humanties”. The project is funded by the DFG. Please visit https://sites.google.com/a/budabe.eu/xmlprint_de/kontakt and let us know, what you think about XML-Print – Does it meet your expectations? – What is missing? – Do you use it regularly? Thank you.
    Downloads: 1 This Week
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  • 23
    DataShot
    ...Includes a PreCapture barcode application refactored from this code base with support from the US National Science Foundation ADBC TCN for New England Vascular Plants NSF #1208835 Precapture Application: http://doi.org/10.5281/zenodo.154176 Migrated to GitHub PreCaptureApp: https://github.com/MCZbase/PreCapture Desktop App https://github.com/MCZbase/DataShot_DesktopApp Web App components: https://github.com/MCZbase/datashot_ejb https://github.com/MCZbase/datashot_web https://github.com/MCZbase/datashot_ee
    Downloads: 0 This Week
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  • 24

    Virtual Cell

    Former home of the Virtual Cell platform (VCell), see http://vcell.org

    This project and all source code has moved to GitHub, see https://github.com/virtualcell
    Downloads: 0 This Week
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  • 25

    IQM-Plugin-frac2D

    Fractal and Lacunarity methods for 2D digital images

    ...By Martin Reiss Installation instruction: Copy newest jar file to the "Plugins" directory which should be located in the directory of your local IQM main application. IQM: https://sourceforge.net/projects/iqm/
    Downloads: 0 This Week
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