https://sourceforge.net/p/bdfunc/activity/Recent activity for BD-FuncenMon, 26 Dec 2022 23:50:02 -0000https://sourceforge.net/projects/bdfunc/files/BD-Func-1.1.7.zip/downloadBD-FuncMon, 26 Dec 2022 23:50:02 -0000https://sourceforge.net/projects/bdfunc/files/BD-Func-1.1.7.zip/downloadhttps://sourceforge.net/projects/bdfunc/files/README.txt/downloadBD-FuncMon, 26 Dec 2022 23:49:02 -0000https://sourceforge.net/projects/bdfunc/files/README.txt/downloadhttps://sourceforge.net/p/bdfunc/discussion/srap/thread/8641dd1e/?limit=25#5f18Hi, If you find the sRAP package useful, I think that is great! However, I don't currently use the sRAP package: I personally use a template-based system, where I frequently have to modify the code (which requires a little more flexiablity than a more formal package, and also makes providing support of scripts for other people more problematic). That said, I do still frequently use BD-Func, so please continue to post questions in the forum in the other sections. I apologize for the confusion and...Charles WardenWed, 08 Aug 2018 03:10:00 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/8641dd1e/?limit=25#5f18https://sourceforge.net/p/bdfunc/discussion/srap/thread/8641dd1e/?limit=25#5f18Hi, If you find the sRAP package useful, I think that is great! However, I don't currently use the sRAP package: I personally use a template-based system, where I frequently have to modify the code (which requires a little more flexiablity than a more formal package, and also makes providing support of scripts for other people more problematic). That said, I do still frequently use BD-Func, so please continue to post questions in the forum in the other sections. Thanks, CharlesCharles WardenWed, 08 Aug 2018 03:08:58 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/8641dd1e/?limit=25#5f18https://sourceforge.nethttps%3A//sourceforge.net/projects/bdfunc/files/BD-Func-1.1.6.zip/downloadBD-FuncMon, 18 Sep 2017 21:07:02 -0000https://sourceforge.net/projects/bdfunc/files/BD-Func-1.1.6.zip/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/bdfunc/files/BD-Func-1.1.5.zip/downloadBD-FuncThu, 05 Jan 2017 20:13:03 -0000https://sourceforge.net/projects/bdfunc/files/BD-Func-1.1.5.zip/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/bdfunc/files/BD-Func-1.1.4.zip/downloadBD-FuncTue, 06 Dec 2016 19:46:14 -0000https://sourceforge.net/projects/bdfunc/files/BD-Func-1.1.4.zip/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/bdfunc/files/BD-Func-1.1.3.zip/downloadBD-FuncSat, 27 Aug 2016 00:38:02 -0000https://sourceforge.net/projects/bdfunc/files/BD-Func-1.1.3.zip/downloadhttps://sourceforge.net/p/bdfunc/discussion/srap/thread/267ecdf2/?limit=25#fd75UPDATE: The yeast GO terms are pretty different than the human and mouse GO terms....Charles WardenTue, 15 Apr 2014 20:24:56 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/267ecdf2/?limit=25#fd75https://sourceforge.net/p/bdfunc/discussion/srap/thread/267ecdf2/?limit=25#6b48Thank you for using sRAP. sRAP (and I assume CLC Bio) will be giving you a list of...Charles WardenThu, 10 Apr 2014 19:26:05 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/267ecdf2/?limit=25#6b48https://sourceforge.nethttp%3A//sourceforge.net/projects/bdfunc/files/BD-Func-1.1.2.zip/downloadBD-FuncTue, 01 Apr 2014 18:20:08 -0000http://sourceforge.net/projects/bdfunc/files/BD-Func-1.1.2.zip/downloadhttps://sourceforge.net/p/bdfunc/discussion/srap/thread/a316cef3/?limit=25#1a37Hi, The expression.table is just a file name. The file is not read until after the...Charles WardenMon, 24 Mar 2014 22:20:05 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/a316cef3/?limit=25#1a37https://sourceforge.net/p/bdfunc/discussion/srap/thread/a316cef3/?limit=25#1a37Hi, The expression.table is just a file name. The file is not read until after the...Charles WardenMon, 24 Mar 2014 22:19:38 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/a316cef3/?limit=25#1a37https://sourceforge.net/p/bdfunc/discussion/srap/thread/a316cef3/?limit=25#1a37Hi, The expression.table is just a file name. The file is not read until after the...Charles WardenMon, 24 Mar 2014 22:18:33 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/a316cef3/?limit=25#1a37https://sourceforge.net/p/bdfunc/discussion/srap/thread/afa0fcf8/?limit=25#3741I really find your paper interesting because I have some weird statistic after the...Charles WardenTue, 18 Mar 2014 19:25:33 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/afa0fcf8/?limit=25#3741https://sourceforge.net/p/bdfunc/discussion/srap/thread/afa0fcf8/?limit=25#1d89Here are the possible suggestions that I can think of: 1) What was the total number...Charles WardenTue, 18 Mar 2014 19:24:59 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/afa0fcf8/?limit=25#1d89https://sourceforge.net/p/bdfunc/discussion/srap/thread/afa0fcf8/?limit=25#1d89Here are the possible suggestions that I can think of: 1) What was the total number...Charles WardenTue, 18 Mar 2014 19:24:16 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/afa0fcf8/?limit=25#1d89https://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#a756I would probably try to leave the log2Ratio as is. At least the way I define fold-change,...Charles WardenMon, 03 Feb 2014 01:42:24 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#a756https://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#bebeOk, good - this makes sense. If you do use Excel, you should remember that those...Charles WardenMon, 03 Feb 2014 01:40:36 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#bebehttps://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#80ebOk - in the long term, I will work on troubleshooting this problem (since it would...Charles WardenMon, 03 Feb 2014 01:36:34 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#80ebhttps://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#380fThank you for using sRAP! I may have to sit down to review the code more carefully,...Charles WardenMon, 03 Feb 2014 01:34:48 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/cb480d5a/?limit=25#380fhttps://sourceforge.net/p/bdfunc/discussion/srap/thread/4f543d8f/?limit=25#1575There are two ways to use BD-Func (standalone version provided here and the sRAP...Charles WardenSun, 02 Feb 2014 18:10:21 -0000https://sourceforge.net/p/bdfunc/discussion/srap/thread/4f543d8f/?limit=25#1575