Activity for BIGSdbhttps://sourceforge.net/p/bigsdb/activity/Recent activity for BIGSdbenFri, 18 Jul 2025 07:14:04 -0000Keith Jolley committed [b5e507] on Codehttps://sourceforge.net/p/bigsdb/code/ci/b5e507f15f7c667bf65cc8ceca2dc26411a29e11/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/b5e507f15f7c667bf65cc8ceca2dc26411a29e11/Keith Jolley committed [71f533] on Codehttps://sourceforge.net/p/bigsdb/code/ci/71f533e6227c5208b48bb126d40f7582db0505a5/Version 1.51.4.Keith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/71f533e6227c5208b48bb126d40f7582db0505a5/Keith Jolley committed [252be0] on Codehttps://sourceforge.net/p/bigsdb/code/ci/252be08dc0956f40ad0066dde5749b6c6ce553cf/Typo.Keith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/252be08dc0956f40ad0066dde5749b6c6ce553cf/Keith Jolley committed [305046] on Codehttps://sourceforge.net/p/bigsdb/code/ci/305046ab612216f19c2d96fd8646958ca981a6a7/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/305046ab612216f19c2d96fd8646958ca981a6a7/Keith Jolley committed [de8589] on Codehttps://sourceforge.net/p/bigsdb/code/ci/de858904516973984f2d2ec6f0fd35429075929e/Only update progress after checking all dbs for isolate.Keith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/de858904516973984f2d2ec6f0fd35429075929e/Keith Jolley committed [0531d2] on Codehttps://sourceforge.net/p/bigsdb/code/ci/0531d29ed326e3b2fdc70467088cec84d96b0489/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/0531d29ed326e3b2fdc70467088cec84d96b0489/Keith Jolley committed [b206b9] on Codehttps://sourceforge.net/p/bigsdb/code/ci/b206b9c1763d79098998cac30304df66985b78db/Disconnect from database before destroying job manager.Keith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/b206b9c1763d79098998cac30304df66985b78db/Keith Jolley committed [1e4b7d] on Codehttps://sourceforge.net/p/bigsdb/code/ci/1e4b7d97ec9e084405bd1874ccb92aa633556dd3/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/1e4b7d97ec9e084405bd1874ccb92aa633556dd3/Keith Jolley committed [33b7c6] on Codehttps://sourceforge.net/p/bigsdb/code/ci/33b7c6755b9bf613dd1cba884bc7036331d788c6/Remove logging statements.Keith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/33b7c6755b9bf613dd1cba884bc7036331d788c6/Keith Jolley committed [22af97] on Codehttps://sourceforge.net/p/bigsdb/code/ci/22af9758abbc376c46659418da8c65a77a9e233d/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:04 -0000https://sourceforge.net/p/bigsdb/code/ci/22af9758abbc376c46659418da8c65a77a9e233d/Keith Jolley committed [94b093] on Codehttps://sourceforge.net/p/bigsdb/code/ci/94b0938d5105084d9a9480faf80e7958cbe4ec5a/Avoid unitialized variable warning.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/94b0938d5105084d9a9480faf80e7958cbe4ec5a/Keith Jolley committed [0678af] on Codehttps://sourceforge.net/p/bigsdb/code/ci/0678afdab3f5774aef3a560d8534c0c0f7a12d8e/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/0678afdab3f5774aef3a560d8534c0c0f7a12d8e/Keith Jolley committed [dc247f] on Codehttps://sourceforge.net/p/bigsdb/code/ci/dc247f5969bc161a1a0918bc48ce7bcfb0d29c31/Script to automate running of Kaptive against database.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/dc247f5969bc161a1a0918bc48ce7bcfb0d29c31/Keith Jolley committed [f68169] on Codehttps://sourceforge.net/p/bigsdb/code/ci/f68169201417d990d95cb5dfbdc67e0f76963ccd/Last run time already stored elsewhere.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/f68169201417d990d95cb5dfbdc67e0f76963ccd/Keith Jolley committed [24653b] on Codehttps://sourceforge.net/p/bigsdb/code/ci/24653bd983f5b18718810af1e4be1e25af05d4c7/Progress message should start at 1.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/24653bd983f5b18718810af1e4be1e25af05d4c7/Keith Jolley committed [de1303] on Codehttps://sourceforge.net/p/bigsdb/code/ci/de1303c7124916d64163f2c76b357dd829a76e5f/Don't show Kaptive button if isolate not in required view.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/de1303c7124916d64163f2c76b357dd829a76e5f/Keith Jolley committed [7c105f] on Codehttps://sourceforge.net/p/bigsdb/code/ci/7c105f35a77c0aa5c36438ea31529bda2a6e5666/Save temp files to own directory.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/7c105f35a77c0aa5c36438ea31529bda2a6e5666/Keith Jolley committed [6e153a] on Codehttps://sourceforge.net/p/bigsdb/code/ci/6e153a0faa53caa301f6ac8624947dabebd2b38b/Include Kaptive output on isolate info page.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/6e153a0faa53caa301f6ac8624947dabebd2b38b/Keith Jolley committed [74f294] on Codehttps://sourceforge.net/p/bigsdb/code/ci/74f294cd80a0a3085ce8e20fee5e3b17aa9e4bce/Merge branch 'develop' into 202506_kaptiveKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/74f294cd80a0a3085ce8e20fee5e3b17aa9e4bce/Keith Jolley committed [5143cb] on Codehttps://sourceforge.net/p/bigsdb/code/ci/5143cb25dbf33bfe98458969ac3476548337cafa/Convert output to JSON for storage in analysis table.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/5143cb25dbf33bfe98458969ac3476548337cafa/Keith Jolley committed [05aa22] on Codehttps://sourceforge.net/p/bigsdb/code/ci/05aa22244d1366185b96d51a6ca1f1743c552d4b/Start of Kaptive plugin.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/05aa22244d1366185b96d51a6ca1f1743c552d4b/Keith Jolley committed [75ab51] on Codehttps://sourceforge.net/p/bigsdb/code/ci/75ab51d5803a6fe0f28f458ffa7bd10c06e11260/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/75ab51d5803a6fe0f28f458ffa7bd10c06e11260/Keith Jolley committed [c9b942] on Codehttps://sourceforge.net/p/bigsdb/code/ci/c9b9421bb7b7a8b78c2d450b79eaf2a627a9a77e/Version 1.51.3.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/c9b9421bb7b7a8b78c2d450b79eaf2a627a9a77e/Keith Jolley committed [528973] on Codehttps://sourceforge.net/p/bigsdb/code/ci/528973438c2a39b6daf8586de998779ac68adbf2/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/528973438c2a39b6daf8586de998779ac68adbf2/Keith Jolley committed [ea6ecc] on Codehttps://sourceforge.net/p/bigsdb/code/ci/ea6ecceca41a8efb84ff78486d07ebc89a055f15/Don't list iTOL error if it is just cannot find id in tree.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/ea6ecceca41a8efb84ff78486d07ebc89a055f15/Keith Jolley committed [709a3f] on Codehttps://sourceforge.net/p/bigsdb/code/ci/709a3fb4609c38c5556d09f6aa8f3fd5a0b710fb/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/709a3fb4609c38c5556d09f6aa8f3fd5a0b710fb/Keith Jolley committed [036b71] on Codehttps://sourceforge.net/p/bigsdb/code/ci/036b712d05212fb0c211e102f3d4f97b371a69dd/Option to generate iTOL trees from profiles.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/036b712d05212fb0c211e102f3d4f97b371a69dd/Keith Jolley committed [fd75a0] on Codehttps://sourceforge.net/p/bigsdb/code/ci/fd75a0050c07e77b697a8628c001d5ee30ebdf58/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/fd75a0050c07e77b697a8628c001d5ee30ebdf58/Keith Jolley committed [a39920] on Codehttps://sourceforge.net/p/bigsdb/code/ci/a39920e30be6473130893a28aa5723542ac989ee/Add Genome Comparator citation.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/a39920e30be6473130893a28aa5723542ac989ee/Keith Jolley committed [ef3f38] on Codehttps://sourceforge.net/p/bigsdb/code/ci/ef3f38eaa2a7b586afe58a5d307cda6677a5391f/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/ef3f38eaa2a7b586afe58a5d307cda6677a5391f/Keith Jolley committed [e68070] on Codehttps://sourceforge.net/p/bigsdb/code/ci/e680702994aa30f2e2659fdc985f4582e965a118/Add option to disable distance matrix calculation.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/e680702994aa30f2e2659fdc985f4582e965a118/Keith Jolley committed [2836cc] on Codehttps://sourceforge.net/p/bigsdb/code/ci/2836ccd27eb61a047d2d0da2fb9020413255c36f/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/2836ccd27eb61a047d2d0da2fb9020413255c36f/Keith Jolley committed [b982da] on Codehttps://sourceforge.net/p/bigsdb/code/ci/b982dad9bed4f1799f5ab04e50fdd2b4db0f53a3/Use Inline::C for inner loop of distance matrix calc.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/b982dad9bed4f1799f5ab04e50fdd2b4db0f53a3/Keith Jolley committed [73cba4] on Codehttps://sourceforge.net/p/bigsdb/code/ci/73cba4e75d9f573fe32be4f4192d2e1a10c5c573/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/73cba4e75d9f573fe32be4f4192d2e1a10c5c573/Keith Jolley committed [1216b9] on Codehttps://sourceforge.net/p/bigsdb/code/ci/1216b94f9404d3aecb88da1a9da66931d941ddb2/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/1216b94f9404d3aecb88da1a9da66931d941ddb2/Keith Jolley committed [c47e17] on Codehttps://sourceforge.net/p/bigsdb/code/ci/c47e17c1bfdbcef6f78273216ee10f6af2c45cb6/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/c47e17c1bfdbcef6f78273216ee10f6af2c45cb6/Keith Jolley committed [7491d7] on Codehttps://sourceforge.net/p/bigsdb/code/ci/7491d7d0fea717fcfccdd77aaa24054b744a8b12/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/7491d7d0fea717fcfccdd77aaa24054b744a8b12/Keith Jolley committed [2e441c] on Codehttps://sourceforge.net/p/bigsdb/code/ci/2e441cb3152cb39b6d86d48a13212107d41af0ec/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/2e441cb3152cb39b6d86d48a13212107d41af0ec/Keith Jolley committed [207dcb] on Codehttps://sourceforge.net/p/bigsdb/code/ci/207dcb84199a6ad5f9c0c1a5fc4126a68797e2e9/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/207dcb84199a6ad5f9c0c1a5fc4126a68797e2e9/Keith Jolley committed [afab88] on Codehttps://sourceforge.net/p/bigsdb/code/ci/afab88d4aa6acdde1e5183254308c1531edbc7f9/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/afab88d4aa6acdde1e5183254308c1531edbc7f9/Keith Jolley committed [a00528] on Codehttps://sourceforge.net/p/bigsdb/code/ci/a0052836420de626191f0c66b7861f978485ce4d/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/a0052836420de626191f0c66b7861f978485ce4d/Keith Jolley committed [d00281] on Codehttps://sourceforge.net/p/bigsdb/code/ci/d00281755682a16fac72bb54b2bf8cb6796985bb/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/d00281755682a16fac72bb54b2bf8cb6796985bb/Keith Jolley committed [6c6d4f] on Codehttps://sourceforge.net/p/bigsdb/code/ci/6c6d4f169fd109d2600848eded378e3ca1a0ab00/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/6c6d4f169fd109d2600848eded378e3ca1a0ab00/Keith Jolley committed [c88228] on Codehttps://sourceforge.net/p/bigsdb/code/ci/c88228ee05de0e01d87e2f31340a7ba0329a0351/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/c88228ee05de0e01d87e2f31340a7ba0329a0351/Keith Jolley committed [bd98f7] on Codehttps://sourceforge.net/p/bigsdb/code/ci/bd98f79d9f3ff9c8c1542f8e3961284b3fc537a3/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/bd98f79d9f3ff9c8c1542f8e3961284b3fc537a3/Keith Jolley committed [9bd5b7] on Codehttps://sourceforge.net/p/bigsdb/code/ci/9bd5b7bb74a465690781572a5784bf49a8a15311/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/9bd5b7bb74a465690781572a5784bf49a8a15311/Keith Jolley committed [371973] on Codehttps://sourceforge.net/p/bigsdb/code/ci/3719734e485e28548891953cb598570c10bede43/Rename new alleles. Show progress for ref scan.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/3719734e485e28548891953cb598570c10bede43/Keith Jolley committed [5d8cb6] on Codehttps://sourceforge.net/p/bigsdb/code/ci/5d8cb6432d855974f2d2e9dae3cbb591cce9eb71/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/5d8cb6432d855974f2d2e9dae3cbb591cce9eb71/Keith Jolley committed [cfbcf4] on Codehttps://sourceforge.net/p/bigsdb/code/ci/cfbcf4b2a1bfd478a37e625626af532b11902093/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/cfbcf4b2a1bfd478a37e625626af532b11902093/Keith Jolley committed [f0d6e8] on Codehttps://sourceforge.net/p/bigsdb/code/ci/f0d6e86f6c6753cd2c13ff9cdf1df28b1685c2c7/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/f0d6e86f6c6753cd2c13ff9cdf1df28b1685c2c7/Keith Jolley committed [a5ef2b] on Codehttps://sourceforge.net/p/bigsdb/code/ci/a5ef2ba4df4b7a677f2a3ce88338eb9440d8dfd0/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/a5ef2ba4df4b7a677f2a3ce88338eb9440d8dfd0/Keith Jolley committed [0286d3] on Codehttps://sourceforge.net/p/bigsdb/code/ci/0286d342c2601602f6938c9c6849ee9a474492d2/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/0286d342c2601602f6938c9c6849ee9a474492d2/Keith Jolley committed [1cfd34] on Codehttps://sourceforge.net/p/bigsdb/code/ci/1cfd344184f21181670ede7a23fa725873f11dc4/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/1cfd344184f21181670ede7a23fa725873f11dc4/Keith Jolley committed [b0ae8b] on Codehttps://sourceforge.net/p/bigsdb/code/ci/b0ae8b2df746d2ef1db0afd9b87386e0883a60e6/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/b0ae8b2df746d2ef1db0afd9b87386e0883a60e6/Keith Jolley committed [95e1b1] on Codehttps://sourceforge.net/p/bigsdb/code/ci/95e1b1f77bdb371d854c9ba2ee2eafc425a37124/Set BLAST reward to 2 (same as BLAST plugin default).Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/95e1b1f77bdb371d854c9ba2ee2eafc425a37124/Keith Jolley committed [9ae376] on Codehttps://sourceforge.net/p/bigsdb/code/ci/9ae376134a121aaef45f6499aa52dc561e5a80f0/Don't include group_list in job params.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/9ae376134a121aaef45f6499aa52dc561e5a80f0/Keith Jolley committed [09c7a2] on Codehttps://sourceforge.net/p/bigsdb/code/ci/09c7a2d78634efdb92dc81d7639a23d588e159a0/Protein alignment filename changed.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/09c7a2d78634efdb92dc81d7639a23d588e159a0/Keith Jolley committed [8820e8] on Codehttps://sourceforge.net/p/bigsdb/code/ci/8820e8d407b4e20aadaffcb612e0c9c85a8bb618/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/8820e8d407b4e20aadaffcb612e0c9c85a8bb618/Keith Jolley committed [7cfcbb] on Codehttps://sourceforge.net/p/bigsdb/code/ci/7cfcbb41587ddd2e87d97c7b0930d584b929e5e0/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/7cfcbb41587ddd2e87d97c7b0930d584b929e5e0/Keith Jolley committed [3de464] on Codehttps://sourceforge.net/p/bigsdb/code/ci/3de464f69f2ba3c7a80871c01e126b6ad1563f3c/Include protein alignment if it is generated.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/3de464f69f2ba3c7a80871c01e126b6ad1563f3c/Keith Jolley committed [b7839c] on Codehttps://sourceforge.net/p/bigsdb/code/ci/b7839c227ca82a606ac62f4d71bfb7a798b626f8/Add screenshot.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/b7839c227ca82a606ac62f4d71bfb7a798b626f8/Keith Jolley committed [d8fa3f] on Codehttps://sourceforge.net/p/bigsdb/code/ci/d8fa3ff639bb9e9655b5d6506ad2324a4b6bbe79/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/d8fa3ff639bb9e9655b5d6506ad2324a4b6bbe79/Keith Jolley committed [6ac896] on Codehttps://sourceforge.net/p/bigsdb/code/ci/6ac8964c8df57f902924010b37af9a6abe33a30f/Crop logo and add drop-shadow.Keith JolleyFri, 18 Jul 2025 07:14:03 -0000https://sourceforge.net/p/bigsdb/code/ci/6ac8964c8df57f902924010b37af9a6abe33a30f/Keith Jolley committed [051ff6] on Codehttps://sourceforge.net/p/bigsdb/code/ci/051ff641846fdc7fa01b432d481fe4eda3b01599/Add GeneScanner logo.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/051ff641846fdc7fa01b432d481fe4eda3b01599/Keith Jolley committed [b065d0] on Codehttps://sourceforge.net/p/bigsdb/code/ci/b065d052271b4a7b416bf0943a513d86ba3ccb2b/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/b065d052271b4a7b416bf0943a513d86ba3ccb2b/Keith Jolley committed [cc12d5] on Codehttps://sourceforge.net/p/bigsdb/code/ci/cc12d5d83f77f8ec156d91f7a9f0b144bf84f9de/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/cc12d5d83f77f8ec156d91f7a9f0b144bf84f9de/Keith Jolley committed [f61aed] on Codehttps://sourceforge.net/p/bigsdb/code/ci/f61aeddee1d39dfd74e08f89a0ab3561c2070072/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/f61aeddee1d39dfd74e08f89a0ab3561c2070072/Keith Jolley committed [f61aed] on 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Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/69a01f4139715ac961388777731511990e4f10e3/Keith Jolley committed [9f99a7] on Codehttps://sourceforge.net/p/bigsdb/code/ci/9f99a76f612f97fa0892674680fc18e97036e455/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/9f99a76f612f97fa0892674680fc18e97036e455/Keith Jolley committed [2d24af] on Codehttps://sourceforge.net/p/bigsdb/code/ci/2d24af55598799e06ab1b5a4dc64b59a3b32b643/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/2d24af55598799e06ab1b5a4dc64b59a3b32b643/Keith Jolley committed [fc481d] on Codehttps://sourceforge.net/p/bigsdb/code/ci/fc481db07c896c045ca6c7a1f637824600b9fa60/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/fc481db07c896c045ca6c7a1f637824600b9fa60/Keith Jolley committed [0d1aae] on 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Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/99d5281f8166adb66a792b3a3b7278e7e8102f35/Keith Jolley committed [2b586d] on Codehttps://sourceforge.net/p/bigsdb/code/ci/2b586d956b38c0d26f084ea3c8b4b391c33a14b2/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/2b586d956b38c0d26f084ea3c8b4b391c33a14b2/Keith Jolley committed [2df0ed] on Codehttps://sourceforge.net/p/bigsdb/code/ci/2df0edf5d5c814f64ec6c58736fa7669d37f9589/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/2df0edf5d5c814f64ec6c58736fa7669d37f9589/Keith Jolley committed [f838e2] on Codehttps://sourceforge.net/p/bigsdb/code/ci/f838e2cbe4fea497966a15e1b6ea861dd605a4cb/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/f838e2cbe4fea497966a15e1b6ea861dd605a4cb/Keith Jolley committed [beb195] on Codehttps://sourceforge.net/p/bigsdb/code/ci/beb19597e322d1261cb41933b34b8fa5659e6bc4/Output filenames have changed.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/beb19597e322d1261cb41933b34b8fa5659e6bc4/Keith Jolley committed [5894aa] on Codehttps://sourceforge.net/p/bigsdb/code/ci/5894aac404998df6b83842282bba55722ab19cec/Update GitHub address.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/5894aac404998df6b83842282bba55722ab19cec/Keith Jolley committed [944e33] on Codehttps://sourceforge.net/p/bigsdb/code/ci/944e33b29826cea5a14be7b1267fd208a39c70c2/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/944e33b29826cea5a14be7b1267fd208a39c70c2/Keith Jolley committed [be1210] on Codehttps://sourceforge.net/p/bigsdb/code/ci/be1210a1ed18234b801b55fa6e6bfe8ef6f34b34/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/be1210a1ed18234b801b55fa6e6bfe8ef6f34b34/Keith Jolley committed [8e321b] on Codehttps://sourceforge.net/p/bigsdb/code/ci/8e321b0502ee1b305989d53626bdd742b1c82eb7/Fix sequence extraction where contig breaks at each end.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/8e321b0502ee1b305989d53626bdd742b1c82eb7/Keith Jolley committed [463628] on Codehttps://sourceforge.net/p/bigsdb/code/ci/46362835af8a9a75d559f8eb202e95d2a80694b6/Output filename varies depending on analysis.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/46362835af8a9a75d559f8eb202e95d2a80694b6/Keith Jolley committed [a26f47] on Codehttps://sourceforge.net/p/bigsdb/code/ci/a26f47a05cdacef2a811b2f95abd5fcd3e2a1791/Genescanner update to reflect new available options.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/a26f47a05cdacef2a811b2f95abd5fcd3e2a1791/Keith Jolley committed [ef60ff] on Codehttps://sourceforge.net/p/bigsdb/code/ci/ef60ff55a512a28350eb3cf9d03f5bad8471eadc/Specify that DNA or proteins sequence can be used.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/ef60ff55a512a28350eb3cf9d03f5bad8471eadc/Keith Jolley committed [9dfbe3] on Codehttps://sourceforge.net/p/bigsdb/code/ci/9dfbe371539e292d4951e671b0a2e6d3af9e28d4/Support for peptide input sequence.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/9dfbe371539e292d4951e671b0a2e6d3af9e28d4/Keith Jolley committed [169eb3] on Codehttps://sourceforge.net/p/bigsdb/code/ci/169eb32d8270fd63b1d14a4483c24946ee7f40f8/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/169eb32d8270fd63b1d14a4483c24946ee7f40f8/Keith Jolley committed [a96fa2] on Codehttps://sourceforge.net/p/bigsdb/code/ci/a96fa2df6d5545174a9ca2e039272e16f1b9f0a3/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/a96fa2df6d5545174a9ca2e039272e16f1b9f0a3/Keith Jolley committed [2fb759] on Codehttps://sourceforge.net/p/bigsdb/code/ci/2fb7598c407939fa4e3f891299d6382db54ed54e/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/2fb7598c407939fa4e3f891299d6382db54ed54e/Keith Jolley committed [1e4945] on Codehttps://sourceforge.net/p/bigsdb/code/ci/1e49450b54f5c009a313d7c4550fe51a44b805d8/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/1e49450b54f5c009a313d7c4550fe51a44b805d8/Keith Jolley committed [fcb252] on Codehttps://sourceforge.net/p/bigsdb/code/ci/fcb25251ea052b3f7aeb25979c934b9ba10958a7/Merge branch 'develop' into 202412_caroKeith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/fcb25251ea052b3f7aeb25979c934b9ba10958a7/Keith Jolley committed [08568d] on Codehttps://sourceforge.net/p/bigsdb/code/ci/08568d62f7652aa45c23d2c0e583dc736464be0b/Typo.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/08568d62f7652aa45c23d2c0e583dc736464be0b/Keith Jolley committed [08568d] on Codehttps://sourceforge.net/p/bigsdb/code/ci/08568d62f7652aa45c23d2c0e583dc736464be0b/Typo.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/08568d62f7652aa45c23d2c0e583dc736464be0b/Keith Jolley committed [562518] on Codehttps://sourceforge.net/p/bigsdb/code/ci/56251829b147123488065688ce9e0ce3b2df6ba0/Increase GeneScanner limit to 5000.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/56251829b147123488065688ce9e0ce3b2df6ba0/Keith Jolley committed [983fa3] on Codehttps://sourceforge.net/p/bigsdb/code/ci/983fa398e6efefa152fb3a40523a126f9bea5b09/Genescanner support for running snp-sites.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/983fa398e6efefa152fb3a40523a126f9bea5b09/Keith Jolley committed [f20496] on Codehttps://sourceforge.net/p/bigsdb/code/ci/f20496c0ba190ad7d2bb2e01413f88938e62f887/Genescanner support for setting reference sequence.Keith JolleyFri, 18 Jul 2025 07:14:02 -0000https://sourceforge.net/p/bigsdb/code/ci/f20496c0ba190ad7d2bb2e01413f88938e62f887/