https://sourceforge.net/p/clustage/activity/Recent activity for ClustAGEenTue, 20 Oct 2020 15:10:31 -0000https://sourceforge.net/p/clustage/code/ci/ef6825d558b194efece8471574f93d449da9eed9/Merge branch 'develop'Egon A OzerTue, 20 Oct 2020 15:10:31 -0000https://sourceforge.net/p/clustage/code/ci/ef6825d558b194efece8471574f93d449da9eed9/https://sourceforge.net/p/clustage/code/ci/3134ca9f71c51c7ac74b4ca158fba4634a67fd7b/Added age set extension and ability to select external blast to useEgon A OzerTue, 20 Oct 2020 15:10:22 -0000https://sourceforge.net/p/clustage/code/ci/3134ca9f71c51c7ac74b4ca158fba4634a67fd7b/https://sourceforge.net/p/clustage/code/ci/9d7cf1d6dd859f915da086733e8472249f5784d3/added reference subelement capabilityEgon A OzerTue, 20 Oct 2020 14:45:21 -0000https://sourceforge.net/p/clustage/code/ci/9d7cf1d6dd859f915da086733e8472249f5784d3/https://sourceforge.net/p/clustage/code/ci/b6c95137be7e48d467cd955be24d37827a33b0ed/Merge branch 'develop'Egon A OzerTue, 20 Oct 2020 14:45:21 -0000https://sourceforge.net/p/clustage/code/ci/b6c95137be7e48d467cd955be24d37827a33b0ed/https://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/ClustAGE_v0.8.linux.zip/downloadClustAGETue, 06 Feb 2018 21:30:02 -0000https://sourceforge.net/projects/clustage/files/ClustAGE_v0.8.linux.zip/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/ClustAGE_v0.8.osx.zip/downloadClustAGETue, 06 Feb 2018 21:30:02 -0000https://sourceforge.net/projects/clustage/files/ClustAGE_v0.8.osx.zip/downloadhttps://sourceforge.net/p/clustage/code/ci/f20f3aa733d078a13e2ba15e3949734d2adc1731/updated readmeEgon A OzerTue, 06 Feb 2018 21:14:41 -0000https://sourceforge.net/p/clustage/code/ci/f20f3aa733d078a13e2ba15e3949734d2adc1731/https://sourceforge.net/p/clustage/code/ci/1695cf767dcf364976e1938e1bf8e161c43685a6/index AGE sequences in files instead of loading sequences to arrayEgon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/1695cf767dcf364976e1938e1bf8e161c43685a6/https://sourceforge.net/p/clustage/code/ci/3b386eba5d7c302bd633cf2645fff81331da884c/removed blastn multithreading. Fixed bug in sub-bin parsing.Egon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/3b386eba5d7c302bd633cf2645fff81331da884c/https://sourceforge.net/p/clustage/code/ci/79792a6191c90bee7f01c148c039a4944e44536f/changed subelement_to_tree matrix output to use NA instead of null for self-vs-self comparisons. Downstream R scripts like NA better.Egon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/79792a6191c90bee7f01c148c039a4944e44536f/https://sourceforge.net/p/clustage/code/ci/f7851e1658a1823239365ff22a721e8ab78140de/memory and speed improvements in per-bin-position alignment handlingEgon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/f7851e1658a1823239365ff22a721e8ab78140de/https://sourceforge.net/p/clustage/code/ci/37fd895c27e1966cdd87ec0d2fe0307e30c4163e/updated readmeEgon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/37fd895c27e1966cdd87ec0d2fe0307e30c4163e/https://sourceforge.net/p/clustage/code/ci/d112f83566f4c7a6003cf7033f0ba1c083cd8dc8/removed File::Which dependencyEgon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/d112f83566f4c7a6003cf7033f0ba1c083cd8dc8/https://sourceforge.net/p/clustage/code/ci/0bf5ec8a1e6f0e50e64b9e5b4386ef1bee0f10b6/updated READMEEgon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/0bf5ec8a1e6f0e50e64b9e5b4386ef1bee0f10b6/https://sourceforge.net/p/clustage/code/ci/872e488563dd71a96eba095391e99b7f90959bf0/added options for subelement border drawing and pdf output for graphicsEgon A OzerTue, 06 Feb 2018 21:14:34 -0000https://sourceforge.net/p/clustage/code/ci/872e488563dd71a96eba095391e99b7f90959bf0/https://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/ClustAGE_v0.7.7.osx.zip/downloadClustAGETue, 12 Sep 2017 14:49:03 -0000https://sourceforge.net/projects/clustage/files/ClustAGE_v0.7.7.osx.zip/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/ClustAGE_v0.7.7.linux.zip/downloadClustAGETue, 12 Sep 2017 14:49:03 -0000https://sourceforge.net/projects/clustage/files/ClustAGE_v0.7.7.linux.zip/downloadhttps://sourceforge.net/p/clustage/code/ci/48f2884d7466ed54e6ac551c1eff31bad8742559/Merge branch 'develop'Egon A OzerTue, 12 Sep 2017 14:35:37 -0000https://sourceforge.net/p/clustage/code/ci/48f2884d7466ed54e6ac551c1eff31bad8742559/https://sourceforge.net/p/clustage/code/ci/3caf302576d619751a9020e90da1dca76f8bc92d/raw file format update. Option to turn off dust masking.Egon A OzerTue, 12 Sep 2017 14:35:24 -0000https://sourceforge.net/p/clustage/code/ci/3caf302576d619751a9020e90da1dca76f8bc92d/https://sourceforge.net/p/clustage/code/ci/946af1842988310404978581e9a582a0567b494f/fixed bug in alignment file output and bug in splitting of sub-bins into sub-sub-bins. Also added unaligned AGE info to verbose outputEgon A OzerTue, 12 Sep 2017 14:35:23 -0000https://sourceforge.net/p/clustage/code/ci/946af1842988310404978581e9a582a0567b494f/https://sourceforge.net/p/clustage/code/ci/859b53ab7c1a42b5250a8c085a8c2f13d6b3e416/several changesEgon A OzerTue, 12 Sep 2017 14:35:23 -0000https://sourceforge.net/p/clustage/code/ci/859b53ab7c1a42b5250a8c085a8c2f13d6b3e416/https://sourceforge.net/p/clustage/code/ci/6a6e59abacde8e9193aff7d1b82d07a6c5a237e0/made weighting by size default for Bray-Curtis calculations, added option to provide seed values instead of randomEgon A OzerTue, 12 Sep 2017 14:35:23 -0000https://sourceforge.net/p/clustage/code/ci/6a6e59abacde8e9193aff7d1b82d07a6c5a237e0/https://sourceforge.net/p/clustage/code/ci/29e203150745b89079ffdc6f48da2e8b09ba24b7/output formatting modifications and bug fix for subelement_annotation_stats.plEgon A OzerTue, 12 Sep 2017 14:35:23 -0000https://sourceforge.net/p/clustage/code/ci/29e203150745b89079ffdc6f48da2e8b09ba24b7/https://sourceforge.net/p/clustage/code/ci/98b722c6112552428f53ad1ffcfa9a0aae8fbfc3/added option to weight Bray-Curtis by subelement lengths to subelements_to_tree.plEgon A OzerTue, 12 Sep 2017 14:35:23 -0000https://sourceforge.net/p/clustage/code/ci/98b722c6112552428f53ad1ffcfa9a0aae8fbfc3/https://sourceforge.net/p/clustage/code/ci/93f39bbb2876abc5ca99d87e4dd4ab40dc53a417/added clustage_read_confirm.pl to repositoryEgon A OzerTue, 12 Sep 2017 14:35:23 -0000https://sourceforge.net/p/clustage/code/ci/93f39bbb2876abc5ca99d87e4dd4ab40dc53a417/https://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/CustAGE.README.pdf/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/CustAGE.README.pdf/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/readme_figures/ClustAGE_algorithm.png/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/readme_figures/ClustAGE_algorithm.png/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/ClustAGE_v0.7.5.osx.zip/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/ClustAGE_v0.7.5.osx.zip/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/README.md/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/README.md/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/readme_figures/tree_example.png/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/readme_figures/tree_example.png/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/readme_figures/clustage_plot_example.png/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/readme_figures/clustage_plot_example.png/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/readme_figures/ClustAGE_graph_example.png/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/readme_figures/ClustAGE_graph_example.png/downloadhttps://sourceforge.nethttps%3A//sourceforge.net/projects/clustage/files/ClustAGE_v0.7.5.linux.zip/downloadClustAGEWed, 31 May 2017 17:16:19 -0000https://sourceforge.net/projects/clustage/files/ClustAGE_v0.7.5.linux.zip/downloadhttps://sourceforge.net/p/clustage/code/ci/faf6235eb538676863ec3dfa747aaad6f6d39db3/readme fixesEgon A OzerWed, 31 May 2017 16:53:23 -0000https://sourceforge.net/p/clustage/code/ci/faf6235eb538676863ec3dfa747aaad6f6d39db3/https://sourceforge.net/p/clustage/code/ci/27482fefbfa606b95a4e35b535f6b1a62192c7b8/readme fixesEgon A OzerWed, 31 May 2017 16:47:59 -0000https://sourceforge.net/p/clustage/code/ci/27482fefbfa606b95a4e35b535f6b1a62192c7b8/https://sourceforge.net/p/clustage/code/ci/f634c9dd8e89388a8f10cca9fe4e7b0a5c88b5cc/fixed readme figuresEgon A OzerWed, 31 May 2017 13:26:45 -0000https://sourceforge.net/p/clustage/code/ci/f634c9dd8e89388a8f10cca9fe4e7b0a5c88b5cc/https://sourceforge.net/p/clustage/code/ci/ae6933b4000dce3e7a50104318a3eb794643ec9f/minor changes to sublements_to_tree output filesEgon A OzerWed, 31 May 2017 13:20:44 -0000https://sourceforge.net/p/clustage/code/ci/ae6933b4000dce3e7a50104318a3eb794643ec9f/https://sourceforge.net/p/clustage/code/ci/52f47f9253e10081d3050f951e1ea8c0270b5ca6/remove leading or trailing spaces from genome IDs in subelement_csv_to_phylip.plEgon A OzerWed, 31 May 2017 13:20:44 -0000https://sourceforge.net/p/clustage/code/ci/52f47f9253e10081d3050f951e1ea8c0270b5ca6/https://sourceforge.net/p/clustage/code/ci/a49ff86fc7f7d85f228aeb89cd4e862776ba830e/added ability for subelements_to_tree.pl to collapse branches below minimum threshold bootstrap supportEgon A OzerWed, 31 May 2017 13:20:44 -0000https://sourceforge.net/p/clustage/code/ci/a49ff86fc7f7d85f228aeb89cd4e862776ba830e/https://sourceforge.net/p/clustage/code/ci/179a48b4ac558ab8231deaaab364bb41d83b0cc7/updated readme and license informationEgon A OzerWed, 31 May 2017 13:20:44 -0000https://sourceforge.net/p/clustage/code/ci/179a48b4ac558ab8231deaaab364bb41d83b0cc7/https://sourceforge.net/p/clustage/code/ci/7bd73ac3073d7c5f8e26938c4d4b575dfc70ca55/Updated READMEEgon A OzerFri, 19 May 2017 21:49:06 -0000https://sourceforge.net/p/clustage/code/ci/7bd73ac3073d7c5f8e26938c4d4b575dfc70ca55/https://sourceforge.net/p/clustage/code/ci/2f6239c4bc147fb7cc51f62e3b5b3509b478b3d5/fixed typo in re-rank.plEgon A OzerFri, 19 May 2017 21:49:06 -0000https://sourceforge.net/p/clustage/code/ci/2f6239c4bc147fb7cc51f62e3b5b3509b478b3d5/https://sourceforge.net/p/clustage/code/ci/b9d9778f75ef784eeda24892afb68caca7dab12c/added subelements_to_tree.pl to utilitiesEgon A OzerFri, 19 May 2017 21:49:06 -0000https://sourceforge.net/p/clustage/code/ci/b9d9778f75ef784eeda24892afb68caca7dab12c/https://sourceforge.net/p/clustage/code/ci/9f7bffc52c85f219864ceb98777ee49e20b402ab/subelements_to_tree.pl now can search for needed phylip applications in PATH or in bin folderEgon A OzerFri, 19 May 2017 21:49:06 -0000https://sourceforge.net/p/clustage/code/ci/9f7bffc52c85f219864ceb98777ee49e20b402ab/https://sourceforge.net/p/clustage/code/ci/e5e45cc75867888ee2329b56208160ddf61853d5/updated re-rank.pl for new subelements.key.txt format. Also re-rank.pl now produces figures using gnuplotEgon A OzerFri, 19 May 2017 21:49:06 -0000https://sourceforge.net/p/clustage/code/ci/e5e45cc75867888ee2329b56208160ddf61853d5/https://sourceforge.net/p/clustage/code/ci/e4cbe8c2131b0e6cf44d1feaf9b0c30bec2a7d37/started v0.7.5, filter read coverage data so only extending data included, clean up output formatting, remove redunant codeEgon A OzerFri, 05 May 2017 19:01:17 -0000https://sourceforge.net/p/clustage/code/ci/e4cbe8c2131b0e6cf44d1feaf9b0c30bec2a7d37/https://sourceforge.net/p/clustage/code/ci/c49e272824fc2ae9387520bec6c102e15d0095bc/skip all-N bin representativesEgon A OzerFri, 05 May 2017 19:01:17 -0000https://sourceforge.net/p/clustage/code/ci/c49e272824fc2ae9387520bec6c102e15d0095bc/https://sourceforge.net/p/clustage/code/ci/fdb767c4ad913d71dea75feaa50187cbb64c0ec3/sanity check on automatic thread population for non-Darwin platformsEgon A OzerFri, 05 May 2017 19:01:17 -0000https://sourceforge.net/p/clustage/code/ci/fdb767c4ad913d71dea75feaa50187cbb64c0ec3/https://sourceforge.net/p/clustage/code/ci/bb36588de09119c749945a59e559c52d96bdb8e9/added utility scripts for read count and annotation statisticsEgon A OzerFri, 05 May 2017 19:01:17 -0000https://sourceforge.net/p/clustage/code/ci/bb36588de09119c749945a59e559c52d96bdb8e9/https://sourceforge.net/p/clustage/code/ci/1aa9893de853b0b0cb2d26430751c900298ad1d6/fixed bug that prevented some read corrections not to be output to key.txt or csv filesEgon A OzerFri, 05 May 2017 19:01:17 -0000https://sourceforge.net/p/clustage/code/ci/1aa9893de853b0b0cb2d26430751c900298ad1d6/https://sourceforge.net/p/clustage/code/ci/08e4c8fc5d562269e65910664767118e433d0a8f/added per genome subelement distribution table ...Egon A OzerFri, 07 Apr 2017 20:49:15 -0000https://sourceforge.net/p/clustage/code/ci/08e4c8fc5d562269e65910664767118e433d0a8f/https://sourceforge.net/p/clustage/code/ci/5ce27a73600f13643452fb1f9d0dd2e5b14deeb5/raw alignment data file output; sanity checking...Egon A OzerTue, 14 Mar 2017 18:50:25 -0000https://sourceforge.net/p/clustage/code/ci/5ce27a73600f13643452fb1f9d0dd2e5b14deeb5/https://sourceforge.net/p/clustage/code/ci/ba4bf17c676c9ad2804325fa22134292dceb320a/added option to use pre-determined reference AG...Egon A OzerTue, 14 Mar 2017 18:50:25 -0000https://sourceforge.net/p/clustage/code/ci/ba4bf17c676c9ad2804325fa22134292dceb320a/https://sourceforge.net/p/clustage/code/ci/0873100e8a6b51d75c9e07034adbde291f80ba22/Added output for gui frontend. Allow Excel line...Egon A OzerWed, 01 Feb 2017 22:42:18 -0000https://sourceforge.net/p/clustage/code/ci/0873100e8a6b51d75c9e07034adbde291f80ba22/https://sourceforge.net/p/clustage/code/ci/77b9f9ed892eb681722933f216d75e190bef5fe0/fixed bug preventing some read corrections from...Egon A OzerMon, 23 Jan 2017 21:37:07 -0000https://sourceforge.net/p/clustage/code/ci/77b9f9ed892eb681722933f216d75e190bef5fe0/https://sourceforge.net/p/clustage/code/ci/cb815707f3bfdbdb2946b15f0b2659c118f48341/removed CGView XML outputEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/cb815707f3bfdbdb2946b15f0b2659c118f48341/https://sourceforge.net/p/clustage/code/ci/dea414c8b639bfad4e9000458b32e7f5730e3226/added subelement sequence outputEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/dea414c8b639bfad4e9000458b32e7f5730e3226/https://sourceforge.net/p/clustage/code/ci/b699d3a58d9aa6ad4990d24e97d3b123c4fbf349/color gradients in graph outputEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/b699d3a58d9aa6ad4990d24e97d3b123c4fbf349/https://sourceforge.net/p/clustage/code/ci/6fa8c82f51779cb7fdb34bdfa6c60c6c86033168/added licenseEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/6fa8c82f51779cb7fdb34bdfa6c60c6c86033168/https://sourceforge.net/p/clustage/code/ci/4b839773f700f2add9965ec7c0ea3000106b83c3/modifications to web outputEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/4b839773f700f2add9965ec7c0ea3000106b83c3/https://sourceforge.net/p/clustage/code/ci/899282530ac4a4f18148035b43bd93ee0fca8a04/alignments added by read correction displayed m...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/899282530ac4a4f18148035b43bd93ee0fca8a04/https://sourceforge.net/p/clustage/code/ci/91c734bcf124339c24b43b43bfd47b894037e520/fixed glitch where read correction was breaking...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/91c734bcf124339c24b43b43bfd47b894037e520/https://sourceforge.net/p/clustage/code/ci/afd9594ef2d6a64f9db855292d61c92aca6c071d/deal with blank rank valuesEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/afd9594ef2d6a64f9db855292d61c92aca6c071d/https://sourceforge.net/p/clustage/code/ci/041676f736a3881a1404ea88a771398644a2855b/Added tkx GUI scriptEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/041676f736a3881a1404ea88a771398644a2855b/https://sourceforge.net/p/clustage/code/ci/5a2e73bbdbe9ba4b6186f4e8a61df4512e28dece/fixed a minor issue where segments that were ex...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/5a2e73bbdbe9ba4b6186f4e8a61df4512e28dece/https://sourceforge.net/p/clustage/code/ci/f1896f77ce90027ab364234648e882c550662be8/few more output file header tweaksEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/f1896f77ce90027ab364234648e882c550662be8/https://sourceforge.net/p/clustage/code/ci/15c63e198a1875f40b4f546d1e269c217ed31924/Added output of read-corrected subelement seque...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/15c63e198a1875f40b4f546d1e269c217ed31924/https://sourceforge.net/p/clustage/code/ci/0073219b6adccf0478331ee618c03c93d3055e4b/limit bwa threads to 16 or less as memory alloc...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/0073219b6adccf0478331ee618c03c93d3055e4b/https://sourceforge.net/p/clustage/code/ci/ec0b9bbd9f97b5bd1798f98d44e852c59eff6799/added subelement sequence size to log outputEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/ec0b9bbd9f97b5bd1798f98d44e852c59eff6799/https://sourceforge.net/p/clustage/code/ci/228f0fbe3ea25da1f6588eb5b426e417f3f39f01/Fixed web output. Also fixed error in options i...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/228f0fbe3ea25da1f6588eb5b426e417f3f39f01/https://sourceforge.net/p/clustage/code/ci/c411bb9f88d5aaa84253508e9aec19e0a96dd2db/Add README and 3rd party copyright infoEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/c411bb9f88d5aaa84253508e9aec19e0a96dd2db/https://sourceforge.net/p/clustage/code/ci/877fa6eefd6dc36544718ca48da0b0037bbaa027/Minor web output fixesEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/877fa6eefd6dc36544718ca48da0b0037bbaa027/https://sourceforge.net/p/clustage/code/ci/ee1ed158cf5f5cedad7b6ea0e4fba0ac5b13fa7f/gnuplot terminal automatically selected based o...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/ee1ed158cf5f5cedad7b6ea0e4fba0ac5b13fa7f/https://sourceforge.net/p/clustage/code/ci/b8f446d3080643313412eb1099bc03a92c94597a/changed bin_end to bin_stop in output to better...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/b8f446d3080643313412eb1099bc03a92c94597a/https://sourceforge.net/p/clustage/code/ci/4fcb81fd16ae004acbdc07a507b48f1d7ab152e4/added binaries to gitEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/4fcb81fd16ae004acbdc07a507b48f1d7ab152e4/https://sourceforge.net/p/clustage/code/ci/dac0b4a5e9858897b1855537646c8a232bcaa05f/web output tweaksEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/dac0b4a5e9858897b1855537646c8a232bcaa05f/https://sourceforge.net/p/clustage/code/ci/fce72927ab45e1d8b20e4bfc7d450839985e067f/tweaked column headers on AGEs.annotations.txt ...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/fce72927ab45e1d8b20e4bfc7d450839985e067f/https://sourceforge.net/p/clustage/code/ci/b6312525332a36db525e92a364a2860bccff6f49/Add README and 3rd party copyright infoEgon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/b6312525332a36db525e92a364a2860bccff6f49/https://sourceforge.net/p/clustage/code/ci/b7c8793711efa318163a6c7af5c4bbf15633a11d/replaced arrow subroutine (accidentally removed...Egon A OzerThu, 12 Jan 2017 23:16:12 -0000https://sourceforge.net/p/clustage/code/ci/b7c8793711efa318163a6c7af5c4bbf15633a11d/https://sourceforge.net/p/clustage/code/ci/1e4f3978117c54c992cfd882f7b4325e7a39cc6d/binary file checkEgon A OzerThu, 12 Jan 2017 23:12:39 -0000https://sourceforge.net/p/clustage/code/ci/1e4f3978117c54c992cfd882f7b4325e7a39cc6d/https://sourceforge.net/p/clustage/code/ci/e4f106704752277024ad8da0ee0a061f9e701687/Added annotations to output figuresEgon A OzerThu, 12 Jan 2017 23:12:39 -0000https://sourceforge.net/p/clustage/code/ci/e4f106704752277024ad8da0ee0a061f9e701687/https://sourceforge.net/p/clustage/code/ci/2b417861913857c7e6bcb521daf5f97057dfe500/added minimum alignment length optionEgon A OzerThu, 12 Jan 2017 23:12:39 -0000https://sourceforge.net/p/clustage/code/ci/2b417861913857c7e6bcb521daf5f97057dfe500/https://sourceforge.net/p/clustage/code/ci/50099fd5ba5359d4e298c63f122e4fbf1d6161a8/fixed annotation arrow head lengthsEgon A OzerThu, 12 Jan 2017 23:12:39 -0000https://sourceforge.net/p/clustage/code/ci/50099fd5ba5359d4e298c63f122e4fbf1d6161a8/https://sourceforge.net/p/clustage/code/ci/01d895dcac113c8dbf47ec32cfbfcb4fe46800a8/initial commit to gitEgon A OzerThu, 12 Jan 2017 23:12:39 -0000https://sourceforge.net/p/clustage/code/ci/01d895dcac113c8dbf47ec32cfbfcb4fe46800a8/https://sourceforge.net/p/clustage/code/ci/0d10b013a3a440ca09d8f2c1b4a53d884325d8e1/added option for web-style outputEgon A OzerThu, 12 Jan 2017 23:12:39 -0000https://sourceforge.net/p/clustage/code/ci/0d10b013a3a440ca09d8f2c1b4a53d884325d8e1/